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Publication
PropertyValue
Working Groups RG Wollnik
SubprojectNone
Open AccessOpen Access Yes
Publication TypePreprint
Peer ReviewedNo
DOIDOI 10.1101/2024.08.21.24310320
Publication Year2024
TitleGenomic and biological panoramas of non-muscle actinopathies
JournalmedRxiv
ISSNno ISSN (NLM ID:101767986)
URL https://doi.org/10.1101/2024.08.21.24310320
Journal AbbreviationmedRxiv
ExtraNot yet finally published in a peer-reviewed journal
AuthorsDi Donato N, Thom A, Rump A, Greve JN, Kropp M, Cadiñanos J, Calabro S, Cathey S, Chung B, Cope H, Costales M, Cuvertino S, Dinkel P, Erripi K, Fry AE, Garavelli L, Guan K, Hoffjan S, Janzarik WG, Koenig M, Kreimer I, Kuenzel K, Mancini G, Marin-Reina P, Meinhardt A, Niehaus I, Pilz D, Ricca I, Simarro FS, Schrock E, Marquardt A, Taft MH, Tezcan K, Thunström S, Verhagen J, Verloes A, Wollnik B, Krawitz P, Hsieh T, Zeef L, Seifert M, Heide M, Lawrence CB, Roberts N, Manstein D, Woolf AS, Banka S
First AuthorDi Donato N
Last AuthorBanka S

 External Resources

 medrxiv....ll.pdf  Article fulltext

 ENSG00000184009  Ensembl identifier (ENSG00000184009)

 ENSG00000075624  Ensembl identifier (ENSG00000075624.9)

 NM_001101.5  NCBI nucleotide (NM_001101.5, reused)

 NM_001614.5  NCBI nucleotide (NM_001614.5, reused)

 9606  NCBI taxonomy (human, Homo sapiens)

 10090  NCBI taxonomy (mouse, Mus musculus)

 0000-0001-9439-4677  ORCID identifier (Nataliya Di Donato)

 0000-0003-1230-7045  ORCID identifier (Andrew Thom)

 0000-0001-7116-6364  ORCID identifier (Andreas Rump)

 0000-0002-4144-210X  ORCID identifier (Johannes N. Greve)

 0000-0002-3079-6236  ORCID identifier (Marcus Kropp)

 0000-0001-7561-7759  ORCID identifier (Juan Cadiñanos)

 0000-0002-5580-7683  ORCID identifier (Sara Cathey)

 0000-0003-0613-8628  ORCID identifier (Maria Costales)

 0000-0002-6750-5615  ORCID identifier (Sara Cuvertino)

 0000-0002-3503-6682  ORCID identifier (Philine Dinkel)

 0000-0002-7684-3982  ORCID identifier (Livia Garavelli)

 0000-0002-0753-3083  ORCID identifier (Kaomei Guan)

 0000-0002-3651-1385  ORCID identifier (Wibke Gesine Janzarik)

 0000-0002-1211-9979  ORCID identifier (Grazia Maria Simonetta Mancini)

 0000-0003-3780-2077  ORCID identifier (Purificacion Marin-Reina)

 0000-0002-7484-0841  ORCID identifier (Indra Niehaus)

 0000-0002-2488-3309  ORCID identifier (Daniela Pilz)

 0000-0001-8939-1447  ORCID identifier (Ivana Ricca)

 0000-0002-1201-9118  ORCID identifier (Fernando Santos-Simarro)

 0000-0002-3377-1704  ORCID identifier (Evelin Schröck)

 0009-0004-2145-0120  ORCID identifier (Anja Marquardt)

 0000-0001-5853-8629  ORCID identifier (Manuel H. Taft)

 0000-0003-4268-1345  ORCID identifier (Sofia Thunström)

 0000-0002-0340-3433  ORCID identifier (Judith Verhagen)

 0000-0003-4819-0264  ORCID identifier (Alain Verloes)

 0000-0003-2589-0364  ORCID identifier (Bernd Wollnik)

 0000-0002-3194-8625  ORCID identifier (Peter M. Krawitz)

 0000-0003-3828-4419  ORCID identifier (Tzung-Chien Hsieh)

 0000-0003-2833-7847  ORCID identifier (Leo Zeef)

 0000-0003-3518-6813  ORCID identifier (Neil Roberts)

 0000-0003-0763-0147  ORCID identifier (Dietmar Manstein)

 0000-0001-5541-1358  ORCID identifier (Adrian Spencer Woolf)

 0000-0002-8527-2210  ORCID identifier (Siddharth Banka)

 1/635  Research Data Archive (supplemental material)

 03kk7td41  ROR identifier (03kk7td41, Cardiff University)

 03v85ar63  ROR identifier (03v85ar63, Central University Hospital of Asturias)

 03njmea73  ROR identifier (03njmea73, Duke Medical Center)

 018906e22  ROR identifier (018906e22, Erasmus MC)

 02w8ez808  ROR identifier (02w8ez808, Fondazione Stella Maris)

 031t5w623  ROR identifier (031t5w623, German Centre for Cardiovascular Research)

 02f99v835  ROR identifier (02f99v835, German Primate Center)

 03p64mj41  ROR identifier (03p64mj41, Greenwood Genetic Center)

 00f2yqf98  ROR identifier (00f2yqf98, Hannover Medical School)

 01ar2v535  ROR identifier (01ar2v535, Hospital Universitari i Politècnic La Fe)

 01s1q0w69  ROR identifier (01s1q0w69, Hospital Universitario La Paz)

 02q404g62  ROR identifier (02q404g62, Kaiser Permanente Sacramento Medical Center)

 05xy1nn52  ROR identifier (05xy1nn52, Multiscale Bioimaging)

 04y0x0x35  ROR identifier (04y0x0x35, Queen Elizabeth University Hospital)

 04tsk2644  ROR identifier (04tsk2644, Ruhr University Bochum)

 04vgqjj36  ROR identifier (04vgqjj36, Sahlgrenska University Hospital)

 042aqky30  ROR identifier (042aqky30, TU Dresden)

 01xnwqx93  ROR identifier (01xnwqx93, University Hospital Bonn)

 04fgpet95  ROR identifier (04fgpet95, University Hospital of Wales)

 021ft0n22  ROR identifier (021ft0n22, University Medical Center Göttingen)

 0245cg223  ROR identifier (0245cg223, University of Freiburg)

 01tm6cn81  ROR identifier (01tm6cn81, University of Gothenburg)

 02zhqgq86  ROR identifier (02zhqgq86, University of Hong Kong)

 027m9bs27  ROR identifier (027m9bs27, University of Manchester)

 05ctdxz19  ROR identifier (05ctdxz19, University of Messina)

 05f82e368  ROR identifier (05f82e368, Université Paris Cité)

 IMSR_JAX:029888  SciCrunch identifier (RRID:IMSR_JAX:029888, B6.129S6(FVB)-Actbtm1.1Erv/J)

 IMSR_JAX:004782  SciCrunch identifier (RRID:IMSR_JAX:004782, STOCK Tg(KRT14-cre)1Amc/J)

 SCR_015058  SciCrunch identifier (RRID:SCR_015058, bcl2fastq)

 SCR_014555  SciCrunch identifier (RRID:SCR_014555, cBioPortal)

 SCR_006169  SciCrunch identifier (RRID:SCR_006169, ClinVar)

 SCR_017270  SciCrunch identifier (RRID:SCR_017270, ComplexHeatmap)

 SCR_015687  SciCrunch identifier (RRID:SCR_015687, DESeq2)

 SCR_002344  SciCrunch identifier (RRID:SCR_002344, Ensembl)

 SCR_014583  SciCrunch identifier (RRID:SCR_014583, FastQC)

 SCR_012919  SciCrunch identifier (RRID:SCR_012919, featureCounts)

 SCR_014966  SciCrunch identifier (RRID:SCR_014966, GENCODE)

 SCR_016386  SciCrunch identifier (RRID:SCR_016386, Illumina HiSeq 3000/HiSeq 4000 System)

 SCR_014983  SciCrunch identifier (RRID:SCR_014983, Illumina NextSeq 500)

 SCR_003070  SciCrunch identifier (RRID:SCR_003070, ImageJ)

 SCR_018169  SciCrunch identifier (RRID:SCR_018169, Leica SP8 LIGHTNING confocal microscope)

 SCR_014212  SciCrunch identifier (RRID:SCR_014212, Origin)

 SCR_006525  SciCrunch identifier (RRID:SCR_006525, Picard)

 SCR_005275  SciCrunch identifier (RRID:SCR_005275, RSeQC)

 SCR_015899  SciCrunch identifier (RRID:SCR_015899, STAR)

 SCR_011847  SciCrunch identifier (RRID:SCR_011847, Trim Galore)

 SCR_011848  SciCrunch identifier (RRID:SCR_011848, Trimmomatic)

 SCR_013672  SciCrunch identifier (RRID:SCR_013672, ZEN Digital Imaging for Light Microscopy)

 SCR_020925  SciCrunch identifier (RRID:SCR_020925, Zeiss LSM 880 with Airyscan Confocal Laser Scanning Microscope)

 medrxiv....d=true  Supplemental material

 medrxiv....d=true  Supplemental material (table)

 medrxiv....d=true  Supplemental material (video)

 mbexc.de...thies/  Website entry (mbexc.de)

Linked Antibodies

PIDAGTypeAntigen symbolAntibody Registry IDName
primary-0794primaryTUBB3 AB_2313773Purified anti-Tubulin β 3 (TUBB3) Antibody
primary-1093primaryMKI67AB_443209Anti-Ki67 antibody
primary-1979primaryg-CYAAB_2571583Actin Gamma antibody | 2A3
primary-1980primaryβ-CYAAB_2571580Actin Beta antibody | 4C2
primary-1981primaryACTA1AB_2222881pan Actin Antibody (ACTN05 (C4))
primary-1982primarySOX2AB_355110Human/Mouse/Rat SOX2 Antibody
secondary-0250secondaryAB_2535864Donkey anti-Goat IgG (H+L) Cross-Adsorbed Secondary Antibody, Alexa Fluor 647
secondary-0394secondaryAB_141607Donkey anti-Mouse IgG (H+L) Highly Cross-Adsorbed Secondary Antibody, Alexa Fluor 488
secondary-0477secondaryAB_162543Donkey anti-Rabbit IgG (H+L) Highly Cross-Adsorbed Secondary Antibody, Alexa Fluor 555
secondary-0571secondaryAB_2535794Donkey anti-Rat IgG (H+L) Highly Cross-Adsorbed Secondary Antibody, Alexa Fluor 488
secondary-1983secondaryAB_2338854Alexa Fluor® 488 AffiniPure® Goat Anti-Mouse IgG, Fcγ subclass 1 specific
secondary-1984secondaryAB_2338717Cy™5 AffiniPure® Goat Anti-Mouse IgG, Fcγ subclass 2b specific