| Property | Value |
|---|
| Working Groups |  RG Huisken,  RG Moser,  RG Pape |
| Subproject | None |
| Open Access |  Yes |
| Publication Type | Preprint |
| Peer Reviewed | No |
| DOI |  10.1101/2025.11.16.688700 |
| Publication Year | 2025 |
| Title | CochleaNet: deep learning-based image analysis for cochlear connectomics and gene therapy |
| Journal | bioRxiv |
| ISSN | no ISSN (NLM ID:101680187) |
| URL | https://doi.org/10.1101/2025.11.16.688700 |
| Journal Abbreviation | bioRxiv |
| Extra | Not yet finally published in a peer-reviewed journal |
| Authors | Roos L, Diniz AM, Koert E, Schilling M, Uhl M, Thirumalai A, Aakhte M, Kusch K, Huisken J, Moser T, Pape C |
| First Author | Roos L |
| Last Author | Pape C |
External Resources
biorxiv....ll.pdfhttps://www.biorxiv.org/content/10.1101/2025.11.16.688700v1.full.pdf
Article fulltext
10047https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=10047
NCBI taxonomy (Mongolian gerbil, Meriones unguiculatus)
10090https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=10090
NCBI taxonomy (mouse, Mus musculus)
0009-0007-8051-7964https://orcid.org/0009-0007-8051-7964
ORCID identifier (Lennart Roos)
0009-0002-5372-8639https://orcid.org/0009-0002-5372-8639
ORCID identifier (Aleyna Mirac Diniz)
0000-0001-8040-9444https://orcid.org/0000-0001-8040-9444
ORCID identifier (Elisabeth Koert)
0000-0003-3639-3187https://orcid.org/0000-0003-3639-3187
ORCID identifier (Martin Schilling)
0009-0009-4340-1422https://orcid.org/0009-0009-4340-1422
ORCID identifier (Mara Uhl)
0000-0002-3624-0343https://orcid.org/0000-0002-3624-0343
ORCID identifier (Anupriya Thirumalai)
0000-0003-4685-5576https://orcid.org/0000-0003-4685-5576
ORCID identifier (Mostafa Aakhte)
0000-0002-5079-502Xhttps://orcid.org/0000-0002-5079-502X
ORCID identifier (Kathrin Kusch)
0000-0001-7250-3756https://orcid.org/0000-0001-7250-3756
ORCID identifier (Jan Huisken)
0000-0001-7145-0533https://orcid.org/0000-0001-7145-0533
ORCID identifier (Tobias Moser)
0000-0001-6562-7187https://orcid.org/0000-0001-6562-7187
ORCID identifier (Constantin Pape)
15https://rdp.sfb1690.uni-goettingen.de/literature/publication/15
Published Data Registry entry (CRC 1690)
8https://rdp.ekfz.uni-goettingen.de/literature/publication/8
Published Data Registry entry (EKFZ)
1/641https://mbexc.uni-goettingen.de/archive/1/641
Research Data Archive (supplemental material)
02f99v835https://ror.org/02f99v835
ROR identifier (02f99v835, German Primate Center)
03av75f26https://ror.org/03av75f26
ROR identifier (03av75f26, Max Planck Institute for Multidisciplinary Sciences)
05xy1nn52https://ror.org/05xy1nn52
ROR identifier (05xy1nn52, Multiscale Bioimaging)
021ft0n22https://ror.org/021ft0n22
ROR identifier (021ft0n22, University Medical Center Göttingen)
01y9bpm73https://ror.org/01y9bpm73
ROR identifier (01y9bpm73, University of Göttingen)
SCR_021716https://scicrunch.org/resolver/SCR_021716
SciCrunch identifier (RRID:SCR_021716, Cellpose)
SCR_007370https://scicrunch.org/resolver/SCR_007370
SciCrunch identifier (RRID:SCR_007370, Imaris)
SCR_008394https://scicrunch.org/resolver/SCR_008394
SciCrunch identifier (RRID:SCR_008394, Python)
SCR_018536https://scicrunch.org/resolver/SCR_018536
SciCrunch identifier (RRID:SCR_018536, PyTorch)
github.c...ea-nethttps://github.com/computational-cell-analytics/cochlea-net
Supplemental material (code)
computat...a-net/https://computational-cell-analytics.github.io/cochlea-net/
Supplemental material (code)
